Indigo 1.21.0

Released 2024-08-27

Features

  • 1903 Introduce IDT alias for monomers and RNA presets in Ket format

  • 1901 Receive monomer library from Ketcher upon import/export IDT notation

  • 1900 Export of modified RNA to IDT notation (modified IDT monomers)

  • 1899 Import of modified IDT monomers

Bugsfixes

  • 1974 Preview: User can save IDT with 5’ phosphate but cannot open this file again.

  • 1972 Can’t save KET with nameless superatom

  • 1996 Cannot open IDT with MOE sugar.

  • 1960 Fix error message in the SequenceLoader for an invalid sequence

  • 1928 Support monomer to molecule connections type

  • 1878 The structure saved in CML format does not open

  • 1843 FASTA export: 80 chars limit

  • 2000 Exporting a CDX file to ChemDraw loses information about charge on atoms

  • 1997 Export to IDT doesn’t work at all for remote indigo

  • 1993 Micro and macro structures connected through attachment points cannot be opened after save in CDXML format in micro mode

  • 2004 Errors occur when trying to save a macro structure connected to a micro structure to MOL V3000

  • 1994 Micro and macro structures connected through attachment points cannot be opened after save in CDX and Base 64CDX format in micro mode

  • 1992 Micro and macro structures connected through attachment points cannot be saved in Extended SMILES format in micro mode

  • 1990 Micro and macro structures connected through attachment points cannot be saved in CML format in micro mode

  • 1984 Error message is wrong if in case if position indicator in IDT code contradicts real position of the monomer in the chain

  • 1982 Cannot open some expected IDT.

Improvements

  • 1976 Too slow monomer library load

Full Changelog: https://github.com/epam/Indigo/compare/indigo-1.21.0…indigo-1.20.0